MAG TPA_asm: Nitrospina sp.

Kingdom

Pseudomonadati

Phylum

Nitrospinota

Class

Nitrospinia

Order

Nitrospinales

Family

Nitrospinaceae

Genus

Nitrospina

Description

Nitrospina sp. is represented in the MAG TPA_asm with a single replicon, indicating a streamlined genomic structure that may enhance its adaptability in specific environments. The accessions for this organism are cataloged under DMJP00000000.1, which provides a reference point for genomic studies and comparative analyses within microbial ecology. Nitrospina sp. is known for its role in the nitrogen cycle, specifically in the oxidation of nitrite to nitrate, a process crucial for maintaining nitrogen balance in marine ecosystems. This organism contributes to the nitrification process, which is an essential step in the overall nitrogen cycle. As a member of the Nitrospina genus, it is likely adapted to oligotrophic marine environments, where nutrient availability is limited. The presence of a single replicon suggests a high degree of specialization, allowing Nitrospina sp. to efficiently exploit specific ecological niches. This trait may confer advantages in energy conservation and resource utilization, critical for survival in competitive marine habitats. Understanding the genomic organization and traits of Nitrospina sp. can provide insight into its ecological roles and the broader dynamics of nutrient cycling in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumNitrospinota
ClassNitrospinia
OrderNitrospinales
FamilyNitrospinaceae
GenusNitrospina
SpeciesNitrospina sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Nitrospina sp. isolate UBA8891 contig_116499, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ld-carboxypeptidaseDCM60_01220Not AvailablePositive221396 - 22231333368.2
imidazole glycerol phosphate synthase subunit hisfDCM60_01225Not AvailableNegative222318 - 22315430205.1
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseDCM60_01230Not AvailableNegative223144 - 22374621350.4
16s rrna (uracil(1498)-n(3))-methyltransferaseDCM60_01235Not AvailableNegative223747 - 22445725968.4
hypothetical proteinDCM60_01240Not AvailableNegative224495 - 22522327926.3
hypothetical proteinDCM60_01245Not AvailablePositive225359 - 22652842503.7
phosphoserine phosphatase serbDCM60_01250Not AvailableNegative226532 - 22777646070.5
hypothetical proteinDCM60_01255Not AvailableNegative227780 - 22823517206.6
replication-associated recombination protein raraDCM60_01260Not AvailableNegative228399 - 22967946847.7
hypothetical proteinDCM60_01265Not AvailableNegative229705 - 23069437086.8

Displaying genes 241 – 250 of 1879 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.