Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium chelatase | DCM71_04875 | Not Available | Negative | 1041299 - 1042840 | 56791.0 |
| duf4293 domain-containing protein | DCM71_04880 | Not Available | Positive | 1043129 - 1043602 | 17284.6 |
| xenobiotic-transporting atpase | DCM71_04890 | Not Available | Positive | 1046099 - 1048063 | 73253.1 |
| biotin attachment protein | DCM71_04895 | Not Available | Positive | 1048068 - 1049429 | 51333.4 |
| hypothetical protein | DCM71_04900 | Not Available | Positive | 1049546 - 1050997 | 55992.5 |
| family 65 glycosyl hydrolase | DCM71_04905 | Not Available | Positive | 1051117 - 1053456 | 88612.6 |
| xre family transcriptional regulator | DCM71_04910 | Not Available | Negative | 1053579 - 1053956 | 14429.2 |
| yihy/virulence factor brkb family protein | DCM71_04915 | Not Available | Positive | 1054187 - 1054508 | 12031.9 |
| glycosyl transferase family 2 | DCM71_04920 | Not Available | Positive | 1054881 - 1055885 | 38522.1 |
| threonylcarbamoyl-amp synthase | DCM71_04925 | Not Available | Positive | 1055987 - 1056604 | 22995.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
