Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | DCM71_04410 | Not Available | Positive | 946496 - 947278 | 30039.3 |
| hypothetical protein | DCM71_04415 | Not Available | Positive | 947441 - 948400 | 35239.3 |
| gliding motility protein | DCM71_04420 | Not Available | Positive | 948677 - 949792 | 41832.9 |
| gliding motility protein gldl | DCM71_04425 | Not Available | Positive | 949918 - 950610 | 24769.6 |
| gliding motility protein gldm | DCM71_04430 | Not Available | Positive | 950628 - 952223 | 56810.4 |
| gliding motility protein gldn | DCM71_04435 | Not Available | Positive | 952299 - 953372 | 40252.1 |
| glycosyltransferase | DCM71_04440 | Not Available | Negative | 953437 - 954105 | 25274.0 |
| rok family protein | DCM71_04445 | Not Available | Negative | 954106 - 954664 | 20834.7 |
| alpha-glucosidase | DCM71_04450 | Not Available | Negative | 954848 - 956767 | 73118.1 |
| laci family transcriptional regulator | DCM71_04455 | Not Available | Negative | 956850 - 957872 | 38669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
