Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DCM71_03840 | Not Available | Negative | 812879 - 814375 | 54675.6 |
| susc/raga family tonb-linked outer membrane protein | DCM71_03845 | Not Available | Negative | 814400 - 817405 | 108402.0 |
| fructose-6-phosphate aldolase | DCM71_03850 | Not Available | Positive | 817704 - 818360 | 23488.7 |
| phosphonate abc transporter atp-binding protein | DCM71_03855 | Not Available | Positive | 818449 - 819135 | 25492.0 |
| gluconate transporter | DCM71_03860 | Not Available | Positive | 819553 - 819899 | 11955.2 |
| mannonate dehydratase | DCM71_03865 | Not Available | Positive | 819920 - 821038 | 41473.9 |
| glucarate dehydratase | DCM71_03870 | Not Available | Positive | 821220 - 822533 | 47972.7 |
| 5-dehydro-4-deoxyglucarate dehydratase | DCM71_03875 | Not Available | Positive | 822644 - 823549 | 32527.8 |
| hypothetical protein | DCM71_03880 | Not Available | Negative | 823630 - 825138 | 56384.3 |
| dna-binding protein | DCM71_03885 | Not Available | Negative | 825249 - 826310 | 40779.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
