Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCM71_03680 | Not Available | Negative | 778762 - 780288 | 55128.4 |
| hhip-like protein 1 | DCM71_03685 | Not Available | Positive | 780289 - 782928 | 97378.7 |
| hypothetical protein | DCM71_03690 | Not Available | Positive | 783185 - 785032 | 65406.7 |
| ferredoxin | DCM71_03695 | Not Available | Negative | 785056 - 785376 | 11319.5 |
| ferredoxin--nadp(+) reductase | DCM71_03700 | Not Available | Negative | 785393 - 785511 | 4330.2 |
| 30s ribosomal protein s9 | DCM71_03705 | Not Available | Negative | 785517 - 785903 | 14496.7 |
| 50s ribosomal protein l13 | DCM71_03710 | Not Available | Negative | 785906 - 786349 | 16433.0 |
| l-aspartate oxidase | DCM71_03715 | Not Available | Positive | 786626 - 788209 | 59505.2 |
| dimethylmenaquinone methyltransferase | DCM71_03725 | Not Available | Negative | 789624 - 790538 | 33939.9 |
| mandelate racemase/muconate lactonizing enzyme family protein | DCM71_03730 | Not Available | Positive | 790756 - 792189 | 53552.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
