Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylgalactosaminidase | DCM71_03095 | Not Available | Positive | 655644 - 656195 | 20003.0 |
| glucosamine-6-phosphate deaminase | DCM71_03100 | Not Available | Positive | 656498 - 657229 | 27127.4 |
| hypothetical protein | DCM71_03105 | Not Available | Positive | 657248 - 658513 | 47868.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DCM71_03110 | Not Available | Negative | 658585 - 659003 | 15262.4 |
| abc transporter permease | DCM71_03115 | Not Available | Positive | 659037 - 661466 | 90999.4 |
| hypothetical protein | DCM71_03120 | Not Available | Positive | 661531 - 661756 | 9327.17 |
| porin | DCM71_03125 | Not Available | Negative | 661764 - 663155 | 51029.2 |
| hypothetical protein | DCM71_03130 | Not Available | Negative | 663543 - 663965 | 16468.3 |
| hypothetical protein | DCM71_03135 | Not Available | Positive | 664048 - 664383 | 12576.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | DCM71_03140 | Not Available | Negative | 664504 - 665847 | 49336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
