Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCM71_29095 | Not Available | Positive | 6429546 - 6429734 | 7089.15 |
| gntr family transcriptional regulator | DCM71_29100 | Not Available | Positive | 6429737 - 6429955 | 8292.03 |
| hypothetical protein | DCM71_29110 | Not Available | Negative | 6431896 - 6432441 | 20860.1 |
| hypothetical protein | DCM71_29115 | Not Available | Negative | 6432423 - 6433997 | 60448.9 |
| blai/meci/copy family transcriptional regulator | DCM71_29120 | Not Available | Negative | 6433999 - 6434358 | 14075.9 |
| zinc carboxypeptidase | DCM71_29125 | Not Available | Positive | 6434494 - 6437049 | 95057.0 |
| phytanoyl-coa dioxygenase | DCM71_29130 | Not Available | Positive | 6437342 - 6438079 | 27652.3 |
| 3-dehydro-l-gulonate 2-dehydrogenase | DCM71_29135 | Not Available | Positive | 6438100 - 6439119 | 37106.6 |
| radical sam protein | DCM71_29140 | Not Available | Negative | 6439374 - 6440396 | 39160.8 |
| ap endonuclease | DCM71_29145 | Not Available | Negative | 6440436 - 6441362 | 35031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
