Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | DCM71_28940 | Not Available | Negative | 6399163 - 6400650 | 55071.8 |
| succinyl-coa--3-ketoacid-coa transferase | DCM71_28945 | Not Available | Negative | 6401016 - 6402359 | 46553.4 |
| duf58 domain-containing protein | DCM71_28950 | Not Available | Positive | 6402488 - 6403354 | 33419.1 |
| hypothetical protein | DCM71_28955 | Not Available | Positive | 6403514 - 6404110 | 22138.7 |
| tonb-dependent receptor | DCM71_28960 | Not Available | Positive | 6404259 - 6406712 | 91626.1 |
| putative toxin-antitoxin system toxin component, pin family | DCM71_28965 | Not Available | Negative | 6406730 - 6407146 | 15971.2 |
| hypothetical protein | DCM71_28970 | Not Available | Negative | 6407143 - 6407399 | 9665.47 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DCM71_28980 | Not Available | Positive | 6408906 - 6409739 | 30818.6 |
| methylcrotonoyl-coa carboxylase | DCM71_28985 | Not Available | Positive | 6409785 - 6411413 | 58833.7 |
| hypothetical protein | DCM71_28990 | Not Available | Positive | 6411433 - 6412125 | 27113.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
