Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DCM71_28575 | Not Available | Positive | 6309243 - 6311506 | 83137.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DCM71_28580 | Not Available | Positive | 6311525 - 6313120 | 59597.5 |
| hypothetical protein | DCM71_28585 | Not Available | Positive | 6313366 - 6314698 | 49678.9 |
| hypothetical protein | DCM71_28590 | Not Available | Positive | 6314743 - 6317556 | 108637.0 |
| crispr-associated protein cas4 | DCM71_28595 | Not Available | Positive | 6317553 - 6318104 | 21303.5 |
| cusa/czca family heavy metal efflux rnd transporter | DCM71_28605 | Not Available | Negative | 6318405 - 6320231 | 66412.2 |
| efflux rnd transporter periplasmic adaptor subunit | DCM71_28610 | Not Available | Negative | 6320233 - 6322005 | 64906.2 |
| hypothetical protein | DCM71_28615 | Not Available | Negative | 6322002 - 6323216 | 45386.3 |
| hypothetical protein | DCM71_28620 | Not Available | Negative | 6323302 - 6323748 | 16834.0 |
| doxx family protein | DCM71_28625 | Not Available | Positive | 6323881 - 6324294 | 14337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
