Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DCM71_02790 | Not Available | Positive | 591101 - 592696 | 62111.7 |
| glycoside hydrolase family 2 | DCM71_02795 | Not Available | Positive | 592789 - 595578 | 105274.0 |
| 3-carboxymuconate cyclase | DCM71_02800 | Not Available | Positive | 595729 - 596599 | 31120.9 |
| acyltransferase | DCM71_02805 | Not Available | Negative | 596600 - 596721 | 4333.34 |
| xylose isomerase | DCM71_02815 | Not Available | Positive | 599152 - 600090 | 34252.1 |
| hypothetical protein | DCM71_02820 | Not Available | Positive | 600420 - 600782 | 13343.0 |
| hypothetical protein | DCM71_02825 | Not Available | Negative | 601035 - 602627 | 53801.8 |
| hypothetical protein | DCM71_02830 | Not Available | Negative | 602618 - 602848 | 8440.7 |
| hypothetical protein | DCM71_02835 | Not Available | Negative | 603056 - 603280 | 8674.29 |
| atpase | DCM71_02840 | Not Available | Negative | 603501 - 604288 | 29187.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
