Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | DCM71_28115 | Not Available | Positive | 6207056 - 6207928 | 32859.3 |
| hypothetical protein | DCM71_28120 | Not Available | Positive | 6208019 - 6208489 | 17078.3 |
| dna mismatch repair protein mutt | DCM71_28125 | Not Available | Negative | 6208812 - 6209519 | 27331.8 |
| 30s ribosomal protein s6--l-glutamate ligase | DCM71_28130 | Not Available | Negative | 6209570 - 6210472 | 32456.8 |
| atp-dependent zinc protease | DCM71_28135 | Not Available | Negative | 6210590 - 6211060 | 18083.1 |
| susc/raga family tonb-linked outer membrane protein | DCM71_28140 | Not Available | Positive | 6211654 - 6214845 | 117168.0 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_28145 | Not Available | Positive | 6214864 - 6216717 | 69287.4 |
| glycosyl transferase | DCM71_28150 | Not Available | Positive | 6216807 - 6217571 | 28533.6 |
| hypothetical protein | DCM71_28155 | Not Available | Positive | 6217641 - 6218294 | 24876.8 |
| rna-binding protein | DCM71_28160 | Not Available | Positive | 6218319 - 6221732 | 125558.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
