Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DCM71_27140 | Not Available | Positive | 5989069 - 5989755 | 25908.5 |
| sensor histidine kinase | DCM71_27145 | Not Available | Positive | 5989755 - 5991152 | 53563.4 |
| duf2256 domain-containing protein | DCM71_27150 | Not Available | Positive | 5991496 - 5991648 | 6186.55 |
| rna-splicing ligase rtcb | DCM71_27155 | Not Available | Positive | 5992039 - 5993496 | 53906.8 |
| hypothetical protein | DCM71_27160 | Not Available | Positive | 5993571 - 5994497 | 35710.8 |
| valine--trna ligase | DCM71_27165 | Not Available | Positive | 5994573 - 5996998 | 93174.5 |
| trehalase | DCM71_27170 | Not Available | Positive | 5996999 - 5998274 | 48783.4 |
| alpha-amylase | DCM71_27175 | Not Available | Negative | 5998337 - 6000151 | 68513.4 |
| group 1 glycosyl transferase | DCM71_27180 | Not Available | Positive | 6000218 - 6001321 | 42432.7 |
| hypothetical protein | DCM71_27190 | Not Available | Positive | 6001505 - 6002556 | 39581.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
