Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | DCM71_26875 | Not Available | Negative | 5935111 - 5936496 | 51521.5 |
| hypothetical protein | DCM71_26880 | Not Available | Negative | 5936513 - 5936722 | 8088.63 |
| hypothetical protein | DCM71_26885 | Not Available | Positive | 5936740 - 5937270 | 19615.3 |
| xanthan lyase | DCM71_26890 | Not Available | Negative | 5937406 - 5939091 | 63107.9 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_26895 | Not Available | Negative | 5939307 - 5940743 | 53423.0 |
| susc/raga family tonb-linked outer membrane protein | DCM71_26900 | Not Available | Negative | 5940765 - 5943255 | 90552.7 |
| methyltransferase type 11 | DCM71_26905 | Not Available | Negative | 5943256 - 5943323 | 2760.33 |
| hypothetical protein | DCM71_26910 | Not Available | Negative | 5943338 - 5944210 | 32155.4 |
| hypothetical protein | DCM71_26915 | Not Available | Negative | 5944284 - 5944751 | 16858.4 |
| efflux rnd transporter periplasmic adaptor subunit | DCM71_26920 | Not Available | Negative | 5944918 - 5946126 | 44776.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
