Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase | DCM71_25985 | Not Available | Negative | 5735316 - 5736920 | 58915.8 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_25990 | Not Available | Negative | 5737059 - 5738819 | 65206.7 |
| susc/raga family tonb-linked outer membrane protein | DCM71_25995 | Not Available | Negative | 5738901 - 5742119 | 117204.0 |
| hypothetical protein | DCM71_26000 | Not Available | Negative | 5742271 - 5742903 | 23843.6 |
| alpha-l-fucosidase | DCM71_26005 | Not Available | Negative | 5742935 - 5745673 | 102288.0 |
| na+/glucose cotransporter | DCM71_26010 | Not Available | Negative | 5745675 - 5747252 | 58041.6 |
| oxidoreductase | DCM71_26015 | Not Available | Negative | 5747259 - 5748320 | 40014.9 |
| hypothetical protein | DCM71_26020 | Not Available | Negative | 5748386 - 5750992 | 98114.6 |
| endonuclease | DCM71_26025 | Not Available | Negative | 5750913 - 5751803 | 33521.1 |
| sialidase | DCM71_26030 | Not Available | Negative | 5751938 - 5753074 | 41759.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
