Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconate lactonizing mandelate racemase | DCM71_24975 | Not Available | Negative | 5520249 - 5521373 | 41590.9 |
| 3-hydroxyacyl-coa dehydrogenase | DCM71_24980 | Not Available | Negative | 5521373 - 5522332 | 35805.0 |
| hypothetical protein | DCM71_24990 | Not Available | Negative | 5524890 - 5525381 | 17227.5 |
| hypothetical protein | DCM71_24995 | Not Available | Negative | 5525397 - 5526239 | 32565.4 |
| hypothetical protein | DCM71_25000 | Not Available | Negative | 5526384 - 5527031 | 22655.0 |
| rna polymerase subunit sigma-70 | DCM71_25005 | Not Available | Positive | 5527250 - 5527846 | 23345.7 |
| hypothetical protein | DCM71_25010 | Not Available | Positive | 5527927 - 5529573 | 60847.7 |
| duf2520 domain-containing protein | DCM71_25015 | Not Available | Positive | 5529692 - 5530483 | 29477.3 |
| cvpa family protein | DCM71_25020 | Not Available | Negative | 5530538 - 5531062 | 19515.4 |
| glutamyl-trna amidotransferase | DCM71_25025 | Not Available | Negative | 5531059 - 5531511 | 16629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
