Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m28 | DCM71_23815 | Not Available | Positive | 5236633 - 5237673 | 37974.5 |
| patched family protein | DCM71_23820 | Not Available | Positive | 5237830 - 5240160 | 86839.6 |
| xaa-pro aminopeptidase | DCM71_23825 | Not Available | Negative | 5240207 - 5241565 | 52132.8 |
| gnat family n-acetyltransferase | DCM71_23830 | Not Available | Positive | 5241678 - 5242232 | 21260.2 |
| xylose isomerase | DCM71_23835 | Not Available | Negative | 5242229 - 5243146 | 34254.2 |
| hypothetical protein | DCM71_23840 | Not Available | Positive | 5243429 - 5246212 | 103789.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DCM71_23845 | Not Available | Positive | 5246293 - 5246957 | 24603.9 |
| yebc/pmpr family dna-binding transcriptional regulator | DCM71_23850 | Not Available | Negative | 5246996 - 5247709 | 26806.9 |
| diaminopimelate decarboxylase | DCM71_23855 | Not Available | Negative | 5247764 - 5248999 | 45686.9 |
| phosphodiesterase | DCM71_23860 | Not Available | Positive | 5249136 - 5250449 | 50147.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
