Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DCM71_22720 | Not Available | Positive | 5000507 - 5003698 | 117036.0 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_22725 | Not Available | Positive | 5003742 - 5004770 | 38552.1 |
| hypothetical protein | DCM71_22730 | Not Available | Positive | 5004771 - 5006338 | 59223.3 |
| antibiotic abc transporter permease | DCM71_22735 | Not Available | Positive | 5006416 - 5008809 | 89505.5 |
| phenylalanine--trna ligase subunit beta | DCM71_22740 | Not Available | Positive | 5008964 - 5011393 | 89355.5 |
| hypothetical protein | DCM71_22745 | Not Available | Positive | 5011403 - 5011816 | 16428.8 |
| hypothetical protein | DCM71_22750 | Not Available | Positive | 5011827 - 5012135 | 11862.3 |
| ribonuclease y | DCM71_22755 | Not Available | Positive | 5012239 - 5013798 | 58490.5 |
| phosphonate abc transporter atp-binding protein | DCM71_22760 | Not Available | Positive | 5014010 - 5014672 | 24977.9 |
| tolc family protein | DCM71_22765 | Not Available | Positive | 5014705 - 5015971 | 46365.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
