Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpa | DCM71_02215 | Not Available | Negative | 484859 - 486601 | 63090.8 |
| k(+)-transporting atpase subunit f | DCM71_02220 | Not Available | Negative | 486612 - 486692 | 3076.1 |
| hypothetical protein | DCM71_02225 | Not Available | Positive | 486814 - 487077 | 10608.3 |
| vapc toxin family pin domain ribonuclease | DCM71_02230 | Not Available | Positive | 487082 - 487456 | 13804.2 |
| sigma-54-dependent fis family transcriptional regulator | DCM71_02235 | Not Available | Negative | 487491 - 488825 | 49783.4 |
| hypothetical protein | DCM71_02245 | Not Available | Negative | 489790 - 489993 | 7994.88 |
| vapc toxin family pin domain ribonuclease | DCM71_02250 | Not Available | Negative | 490280 - 490660 | 14414.7 |
| oligopeptidase b | DCM71_02260 | Not Available | Positive | 491278 - 493190 | 73751.3 |
| hypothetical protein | DCM71_02265 | Not Available | Positive | 493191 - 494521 | 48644.9 |
| porin family protein | DCM71_02270 | Not Available | Negative | 494589 - 495266 | 24343.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
