Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | DCM71_21885 | Not Available | Positive | 4815852 - 4817573 | 64377.4 |
| hypothetical protein | DCM71_21890 | Not Available | Negative | 4817696 - 4818109 | 15610.5 |
| s9 family peptidase | DCM71_21895 | Not Available | Negative | 4818331 - 4820682 | 88077.4 |
| 4-hydroxybutyrate coa-transferase | DCM71_21900 | Not Available | Positive | 4820897 - 4822183 | 47156.4 |
| uma2 family endonuclease | DCM71_21905 | Not Available | Positive | 4822317 - 4822916 | 23040.7 |
| hypothetical protein | DCM71_21910 | Not Available | Negative | 4822921 - 4825044 | 77884.6 |
| 2,5-diketo-d-gluconic acid reductase | DCM71_21915 | Not Available | Negative | 4825048 - 4825147 | 3592.51 |
| carboxylesterase | DCM71_21920 | Not Available | Negative | 4825217 - 4826839 | 58226.2 |
| hypothetical protein | DCM71_21925 | Not Available | Positive | 4827027 - 4827212 | 6938.65 |
| arac family transcriptional regulator | DCM71_21930 | Not Available | Positive | 4827227 - 4828135 | 35388.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
