Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCM71_21580 | Not Available | Negative | 4751721 - 4752944 | 46946.2 |
| histidine kinase | DCM71_21585 | Not Available | Negative | 4752957 - 4756577 | 137667.0 |
| hypothetical protein | DCM71_21590 | Not Available | Negative | 4756598 - 4759390 | 107860.0 |
| hypothetical protein | DCM71_21595 | Not Available | Positive | 4759594 - 4761348 | 62967.4 |
| hypothetical protein | DCM71_21600 | Not Available | Positive | 4761305 - 4762483 | 42146.5 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_21605 | Not Available | Positive | 4762512 - 4764041 | 56093.1 |
| glycosyltransferase family 2 protein | DCM71_21610 | Not Available | Negative | 4764261 - 4764707 | 16929.2 |
| glycosyl transferase family 2 | DCM71_21615 | Not Available | Negative | 4764821 - 4765636 | 31497.2 |
| glycosyl transferase family 2 | DCM71_21620 | Not Available | Negative | 4765633 - 4766607 | 37576.0 |
| phytanoyl-coa dioxygenase | DCM71_21625 | Not Available | Negative | 4766604 - 4767440 | 31473.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
