Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tropinone reductase | DCM71_21010 | Not Available | Positive | 4631475 - 4632102 | 22715.3 |
| rna polymerase sigma-70 factor | DCM71_21015 | Not Available | Positive | 4632103 - 4632579 | 19032.6 |
| hypothetical protein | DCM71_21020 | Not Available | Positive | 4632603 - 4633607 | 37866.2 |
| susc/raga family tonb-linked outer membrane protein | DCM71_21025 | Not Available | Positive | 4633727 - 4636235 | 93197.6 |
| abc transporter permease | DCM71_21035 | Not Available | Positive | 4637105 - 4638325 | 46181.2 |
| arac family transcriptional regulator | DCM71_21040 | Not Available | Negative | 4638327 - 4639175 | 32914.7 |
| hypothetical protein | DCM71_21045 | Not Available | Negative | 4639417 - 4640040 | 23842.2 |
| hypothetical protein | DCM71_21050 | Not Available | Negative | 4640037 - 4641920 | 71589.5 |
| hypothetical protein | DCM71_21055 | Not Available | Negative | 4642085 - 4643971 | 71927.9 |
| tonb-dependent receptor | DCM71_21060 | Not Available | Negative | 4644000 - 4646581 | 92386.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
