Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | DCM71_20480 | Not Available | Negative | 4516224 - 4519733 | 128950.0 |
| hypothetical protein | DCM71_20485 | Not Available | Negative | 4519805 - 4523164 | 126009.0 |
| tonb-dependent receptor | DCM71_20490 | Not Available | Negative | 4523167 - 4525560 | 90696.8 |
| hypothetical protein | DCM71_20495 | Not Available | Negative | 4525557 - 4526762 | 45694.0 |
| hypothetical protein | DCM71_20500 | Not Available | Negative | 4526759 - 4529536 | 102614.0 |
| rna-binding protein | DCM71_20505 | Not Available | Negative | 4529533 - 4530998 | 53880.3 |
| susc/raga family tonb-linked outer membrane protein | DCM71_20510 | Not Available | Positive | 4530999 - 4531471 | 17460.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DCM71_20515 | Not Available | Positive | 4531536 - 4533029 | 54331.2 |
| gluconate transporter | DCM71_20520 | Not Available | Positive | 4533152 - 4534260 | 39104.6 |
| hypothetical protein | DCM71_20530 | Not Available | Positive | 4535417 - 4535611 | 7389.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
