Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DCM71_20110 | Not Available | Negative | 4418692 - 4421091 | 90591.5 |
| hypothetical protein | DCM71_20115 | Not Available | Negative | 4421269 - 4422315 | 39974.0 |
| preprotein translocase subunit seca | DCM71_20120 | Not Available | Negative | 4422325 - 4424038 | 65222.8 |
| hypothetical protein | DCM71_20125 | Not Available | Negative | 4424205 - 4425410 | 44604.1 |
| hypothetical protein | DCM71_20130 | Not Available | Negative | 4425547 - 4426809 | 47625.2 |
| hypothetical protein | DCM71_20135 | Not Available | Negative | 4426981 - 4429779 | 103542.0 |
| peptidase m28 family protein | DCM71_20140 | Not Available | Negative | 4429794 - 4430121 | 12472.4 |
| glycosyl transferase family 2 | DCM71_20145 | Not Available | Negative | 4430172 - 4431188 | 38585.1 |
| glycosyl transferase | DCM71_20150 | Not Available | Negative | 4431223 - 4432200 | 37935.2 |
| 6-bladed beta-propeller | DCM71_20155 | Not Available | Positive | 4432397 - 4433464 | 39326.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
