Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | DCM71_19785 | Not Available | Negative | 4339718 - 4340032 | 11945.9 |
| outer membrane protein assembly factor bamd | DCM71_19790 | Not Available | Negative | 4340056 - 4340976 | 35580.9 |
| t9ss c-terminal target domain-containing protein | DCM71_19795 | Not Available | Negative | 4341062 - 4341685 | 23024.6 |
| hypothetical protein | DCM71_19800 | Not Available | Negative | 4341850 - 4342236 | 14492.7 |
| iron dicitrate transport regulator fecr | DCM71_19805 | Not Available | Positive | 4342237 - 4342875 | 23624.5 |
| susc/raga family protein | DCM71_19810 | Not Available | Positive | 4343473 - 4346655 | 117919.0 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_19815 | Not Available | Positive | 4346675 - 4348444 | 66374.9 |
| ap endonuclease | DCM71_19825 | Not Available | Positive | 4348727 - 4349779 | 38944.8 |
| phosphotransferase family protein | DCM71_19830 | Not Available | Positive | 4349958 - 4350362 | 15167.0 |
| hypothetical protein | DCM71_19835 | Not Available | Negative | 4350397 - 4351071 | 25011.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
