Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | DCM71_19565 | Not Available | Negative | 4289809 - 4290708 | 33004.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DCM71_19570 | Not Available | Negative | 4290824 - 4292248 | 52092.3 |
| susc/raga family tonb-linked outer membrane protein | DCM71_19575 | Not Available | Negative | 4292305 - 4295481 | 115329.0 |
| duf1361 domain-containing protein | DCM71_19580 | Not Available | Positive | 4295893 - 4296528 | 23747.2 |
| aminopeptidase | DCM71_19585 | Not Available | Negative | 4296633 - 4296830 | 7461.04 |
| aminopeptidase | DCM71_19590 | Not Available | Negative | 4296956 - 4298016 | 38625.6 |
| duf2851 domain-containing protein | DCM71_19595 | Not Available | Negative | 4298102 - 4299376 | 48120.7 |
| flotillin | DCM71_19600 | Not Available | Negative | 4299518 - 4299764 | 8808.91 |
| fatty acid hydroxylase | DCM71_19610 | Not Available | Positive | 4300572 - 4301594 | 39107.6 |
| hypothetical protein | DCM71_19615 | Not Available | Positive | 4302048 - 4303841 | 64195.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
