Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCM71_01840 | Not Available | Negative | 410924 - 411550 | 23468.0 |
| hypothetical protein | DCM71_01845 | Not Available | Negative | 411616 - 412449 | 31651.5 |
| hypothetical protein | DCM71_01850 | Not Available | Negative | 412549 - 412802 | 9566.38 |
| hypothetical protein | DCM71_01855 | Not Available | Positive | 412803 - 413037 | 8176.88 |
| lytic transglycosylase | DCM71_01860 | Not Available | Positive | 413116 - 414597 | 56349.2 |
| protoporphyrinogen oxidase hemj | DCM71_01865 | Not Available | Positive | 414609 - 415145 | 20912.4 |
| peptidase c1 | DCM71_01870 | Not Available | Negative | 415150 - 416244 | 41929.5 |
| gfo/idh/moca family oxidoreductase | DCM71_01875 | Not Available | Positive | 416449 - 417453 | 38154.6 |
| lyttr family transcriptional regulator | DCM71_01880 | Not Available | Positive | 417493 - 418314 | 30997.2 |
| hypothetical protein | DCM71_01885 | Not Available | Positive | 418433 - 419146 | 27185.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
