Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DCM71_18735 | Not Available | Positive | 4105828 - 4106219 | 13834.0 |
| peptidase m28 | DCM71_18740 | Not Available | Negative | 4106220 - 4106415 | 7125.72 |
| hypothetical protein | DCM71_18745 | Not Available | Negative | 4106470 - 4106745 | 10387.5 |
| formylmethionine deformylase | DCM71_18750 | Not Available | Negative | 4106834 - 4107331 | 19398.4 |
| dehydrogenase | DCM71_18755 | Not Available | Positive | 4107580 - 4110492 | 107097.0 |
| susc/raga family tonb-linked outer membrane protein | DCM71_18760 | Not Available | Positive | 4110651 - 4113836 | 114778.0 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_18765 | Not Available | Positive | 4113855 - 4115180 | 46746.5 |
| peptide chain release factor 2 | DCM71_18770 | Not Available | Negative | 4115274 - 4116351 | 41054.2 |
| duf4920 domain-containing protein | DCM71_18775 | Not Available | Negative | 4116451 - 4116903 | 16256.8 |
| hypothetical protein | DCM71_18780 | Not Available | Negative | 4116979 - 4118103 | 44264.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
