Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | DCM71_18530 | Not Available | Positive | 4054416 - 4055162 | 27147.1 |
| eama family transporter | DCM71_18535 | Not Available | Positive | 4055182 - 4056090 | 32996.2 |
| hypothetical protein | DCM71_18540 | Not Available | Negative | 4056201 - 4056776 | 20686.7 |
| hypothetical protein | DCM71_18545 | Not Available | Positive | 4056815 - 4058904 | 76356.8 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_18550 | Not Available | Positive | 4058979 - 4060514 | 54783.3 |
| tonb-dependent receptor | DCM71_18555 | Not Available | Positive | 4060755 - 4063736 | 107413.0 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_18560 | Not Available | Positive | 4063758 - 4065164 | 51310.4 |
| hypothetical protein | DCM71_18565 | Not Available | Positive | 4065216 - 4065719 | 18451.2 |
| hypothetical protein | DCM71_18570 | Not Available | Positive | 4065935 - 4066351 | 15804.4 |
| efflux transporter periplasmic adaptor subunit | DCM71_18575 | Not Available | Positive | 4066611 - 4067717 | 39693.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
