Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DCM71_01790 | Not Available | Negative | 402256 - 403764 | 57909.2 |
| rna polymerase sigma-54 factor | DCM71_01795 | Not Available | Positive | 403914 - 404160 | 9445.79 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | DCM71_01800 | Not Available | Negative | 404161 - 404634 | 18146.1 |
| hypothetical protein | DCM71_01805 | Not Available | Negative | 404730 - 404945 | 8571.09 |
| dna ligase (nad(+)) liga | DCM71_01810 | Not Available | Negative | 404985 - 407042 | 76117.6 |
| cytochrome oxidase subunit iii | DCM71_01815 | Not Available | Negative | 407085 - 407699 | 23211.9 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DCM71_01820 | Not Available | Negative | 407731 - 408221 | 18260.7 |
| hypothetical protein | DCM71_01825 | Not Available | Positive | 408222 - 409030 | 31100.1 |
| glutamate-5-semialdehyde dehydrogenase | DCM71_01830 | Not Available | Positive | 409071 - 410324 | 45909.3 |
| hypothetical protein | DCM71_01835 | Not Available | Negative | 410494 - 410889 | 14743.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
