Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphosulfolactate synthase | DCM71_16140 | Not Available | Positive | 3544901 - 3545692 | 29839.1 |
| four helix bundle protein | DCM71_16145 | Not Available | Positive | 3545846 - 3546199 | 13148.9 |
| deda family protein | DCM71_16150 | Not Available | Positive | 3546363 - 3547013 | 24188.6 |
| rna-binding protein | DCM71_16155 | Not Available | Negative | 3547082 - 3550627 | 130786.0 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_16160 | Not Available | Negative | 3550747 - 3552474 | 62954.6 |
| susc/raga family protein | DCM71_16165 | Not Available | Negative | 3552487 - 3555717 | 116962.0 |
| nudix hydrolase | DCM71_16170 | Not Available | Positive | 3556327 - 3556482 | 5832.1 |
| aspartate aminotransferase family protein | DCM71_16175 | Not Available | Positive | 3556483 - 3557427 | 33584.6 |
| hypothetical protein | DCM71_16180 | Not Available | Negative | 3557481 - 3557942 | 17887.4 |
| hypothetical protein | DCM71_16185 | Not Available | Negative | 3557960 - 3559264 | 49170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
