Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCM71_16085 | Not Available | Positive | 3531547 - 3531620 | 2720.42 |
| atpase | DCM71_16090 | Not Available | Positive | 3531621 - 3531797 | 6829.12 |
| aspartate aminotransferase | DCM71_16095 | Not Available | Positive | 3531800 - 3532930 | 42190.9 |
| s9 family peptidase | DCM71_16100 | Not Available | Negative | 3533014 - 3534173 | 43575.7 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_16105 | Not Available | Negative | 3534174 - 3535400 | 45059.5 |
| acyltransferase | DCM71_16115 | Not Available | Positive | 3538906 - 3539727 | 30998.5 |
| uma2 family endonuclease | DCM71_16120 | Not Available | Negative | 3539767 - 3540339 | 22362.6 |
| serine hydrolase | DCM71_16125 | Not Available | Negative | 3540400 - 3541608 | 46289.4 |
| duf1573 domain-containing protein | DCM71_16130 | Not Available | Negative | 3541720 - 3542124 | 14244.2 |
| transketolase | DCM71_16135 | Not Available | Positive | 3542328 - 3544736 | 89908.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
