Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | DCM71_15825 | Not Available | Negative | 3461704 - 3462579 | 33382.6 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_15830 | Not Available | Negative | 3462802 - 3464436 | 61842.1 |
| susc/raga family tonb-linked outer membrane protein | DCM71_15835 | Not Available | Negative | 3464482 - 3466501 | 75680.8 |
| wyl domain-containing protein | DCM71_15840 | Not Available | Negative | 3466605 - 3467615 | 39489.4 |
| peptidase | DCM71_15845 | Not Available | Positive | 3468186 - 3469286 | 41869.6 |
| choline-sulfatase | DCM71_15850 | Not Available | Positive | 3469501 - 3470904 | 52667.2 |
| sugar phosphate isomerase | DCM71_15855 | Not Available | Positive | 3471011 - 3471868 | 31308.9 |
| rna polymerase sigma-70 factor | DCM71_15860 | Not Available | Positive | 3472117 - 3472674 | 21908.9 |
| hypothetical protein | DCM71_15865 | Not Available | Positive | 3472706 - 3473707 | 37657.1 |
| susc/raga family protein | DCM71_15870 | Not Available | Positive | 3473895 - 3474540 | 23357.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
