Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin--[acetyl-coa-carboxylase] ligase | DCM71_01510 | Not Available | Negative | 346041 - 346805 | 28853.8 |
| ribosome silencing factor | DCM71_01515 | Not Available | Positive | 346844 - 347227 | 14664.5 |
| peptidase m41 | DCM71_01520 | Not Available | Positive | 347346 - 348235 | 32784.5 |
| translation initiation factor if-3 | DCM71_01525 | Not Available | Positive | 348236 - 348481 | 9356.46 |
| dna (cytosine-5-)-methyltransferase | DCM71_01535 | Not Available | Positive | 351152 - 352390 | 46615.0 |
| eco47ii family restriction endonuclease | DCM71_01540 | Not Available | Negative | 352366 - 353130 | 29058.1 |
| ribulose-phosphate 3-epimerase | DCM71_01545 | Not Available | Negative | 353210 - 353866 | 23717.7 |
| 6-o-methylguanine dna methyltransferase | DCM71_01550 | Not Available | Negative | 353910 - 354761 | 31995.2 |
| hypothetical protein | DCM71_01555 | Not Available | Negative | 354837 - 355187 | 13346.9 |
| nudix hydrolase | DCM71_01560 | Not Available | Negative | 355291 - 355842 | 21179.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
