Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DCM71_15250 | Not Available | Negative | 3323269 - 3325080 | 66291.0 |
| susc/raga family tonb-linked outer membrane protein | DCM71_15255 | Not Available | Negative | 3325087 - 3327366 | 83631.5 |
| hypothetical protein | DCM71_15260 | Not Available | Positive | 3327367 - 3328295 | 32488.4 |
| hypothetical protein | DCM71_15265 | Not Available | Positive | 3329072 - 3332819 | 131713.0 |
| oxidoreductase | DCM71_15270 | Not Available | Positive | 3332820 - 3333134 | 12138.4 |
| endo-arabinase | DCM71_15275 | Not Available | Positive | 3333149 - 3333592 | 16239.5 |
| arac family transcriptional regulator | DCM71_15280 | Not Available | Negative | 3333600 - 3334523 | 35757.4 |
| hypothetical protein | DCM71_15285 | Not Available | Negative | 3334649 - 3336247 | 57520.1 |
| hypothetical protein | DCM71_15290 | Not Available | Negative | 3336238 - 3337242 | 37751.7 |
| hypothetical protein | DCM71_15295 | Not Available | Negative | 3337224 - 3337628 | 15684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
