Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCM71_14885 | Not Available | Negative | 3232657 - 3232878 | 8541.27 |
| sugar phosphate isomerase/epimerase | DCM71_14890 | Not Available | Positive | 3232971 - 3233771 | 29552.4 |
| xylose isomerase | DCM71_14895 | Not Available | Positive | 3233830 - 3234759 | 34478.6 |
| abc transporter atp-binding protein | DCM71_14900 | Not Available | Positive | 3234827 - 3235447 | 23487.0 |
| oxidoreductase | DCM71_14905 | Not Available | Positive | 3235611 - 3236442 | 31346.5 |
| susc/raga family tonb-linked outer membrane protein | DCM71_14910 | Not Available | Negative | 3236443 - 3238987 | 92194.3 |
| hypothetical protein | DCM71_14915 | Not Available | Negative | 3239341 - 3240540 | 45897.5 |
| hypothetical protein | DCM71_14920 | Not Available | Negative | 3240555 - 3240797 | 9063.18 |
| 2-oxoisovalerate dehydrogenase | DCM71_14925 | Not Available | Negative | 3240798 - 3241007 | 7881.41 |
| gmp synthase | DCM71_14930 | Not Available | Negative | 3241082 - 3241951 | 33335.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
