Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DCM71_14625 | Not Available | Negative | 3175391 - 3175900 | 19109.8 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DCM71_14630 | Not Available | Positive | 3175946 - 3176776 | 31648.9 |
| ribosome-associated translation inhibitor raia | DCM71_14635 | Not Available | Positive | 3176964 - 3177338 | 14372.3 |
| amidohydrolase | DCM71_14640 | Not Available | Positive | 3177481 - 3179091 | 59987.6 |
| phenylalanine--trna ligase subunit alpha | DCM71_14645 | Not Available | Positive | 3179138 - 3180178 | 39604.0 |
| dna-formamidopyrimidine glycosylase | DCM71_14650 | Not Available | Negative | 3180228 - 3180585 | 13723.5 |
| atp-dependent helicase | DCM71_14655 | Not Available | Positive | 3180734 - 3181999 | 47419.6 |
| histidine kinase | DCM71_14660 | Not Available | Negative | 3182693 - 3182928 | 8228.83 |
| hypothetical protein | DCM71_14665 | Not Available | Negative | 3182929 - 3183346 | 15940.8 |
| duf4386 domain-containing protein | DCM71_14670 | Not Available | Negative | 3183361 - 3184062 | 25896.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
