Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | DCM71_14265 | Not Available | Negative | 3099483 - 3100193 | 27851.0 |
| restriction endonuclease subunit r | DCM71_14270 | Not Available | Negative | 3100180 - 3103161 | 113945.0 |
| feruloyl-coa synthase | DCM71_14275 | Not Available | Positive | 3103219 - 3104811 | 58371.9 |
| 3-hydroxyacyl-coa dehydrogenase | DCM71_14280 | Not Available | Positive | 3104852 - 3105619 | 26661.3 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DCM71_14285 | Not Available | Positive | 3105717 - 3106823 | 41335.1 |
| 4-hydroxyphenyl-beta-ketoacyl-coa hydrolase | DCM71_14290 | Not Available | Positive | 3106928 - 3107800 | 33186.9 |
| alpha/beta hydrolase | DCM71_14295 | Not Available | Positive | 3107914 - 3109032 | 41256.8 |
| padr family transcriptional regulator | DCM71_14300 | Not Available | Negative | 3109063 - 3109201 | 5459.71 |
| hypothetical protein | DCM71_14305 | Not Available | Positive | 3109254 - 3109526 | 10668.7 |
| mfs transporter | DCM71_14310 | Not Available | Positive | 3109669 - 3110826 | 42193.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
