Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DCM71_14010 | Not Available | Negative | 3020565 - 3021881 | 47669.3 |
| susc/raga family tonb-linked outer membrane protein | DCM71_14015 | Not Available | Negative | 3021909 - 3022577 | 24594.6 |
| serine hydrolase | DCM71_14020 | Not Available | Negative | 3022599 - 3025664 | 112893.0 |
| atpase | DCM71_14025 | Not Available | Positive | 3025847 - 3027649 | 66809.4 |
| potassium transporter trka | DCM71_14030 | Not Available | Positive | 3027656 - 3028339 | 25393.1 |
| phosphoenolpyruvate carboxykinase (atp) | DCM71_14035 | Not Available | Positive | 3028458 - 3029417 | 36096.4 |
| susc/raga family tonb-linked outer membrane protein | DCM71_14040 | Not Available | Positive | 3029418 - 3031163 | 64430.3 |
| ragb/susd family nutrient uptake outer membrane protein | DCM71_14045 | Not Available | Positive | 3031208 - 3032674 | 54213.2 |
| fad-dependent oxidoreductase | DCM71_14050 | Not Available | Positive | 3032750 - 3033061 | 10906.1 |
| rna polymerase subunit sigma-24 | DCM71_14055 | Not Available | Positive | 3033088 - 3033633 | 20867.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
