Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | DCM71_13480 | Not Available | Positive | 2905600 - 2907540 | 72451.8 |
| chitooligosaccharide deacetylase | DCM71_13485 | Not Available | Positive | 2907775 - 2908557 | 29134.0 |
| acetylxylan esterase | DCM71_13490 | Not Available | Positive | 2908578 - 2909930 | 49128.6 |
| cupin | DCM71_13495 | Not Available | Negative | 2909950 - 2910744 | 29352.9 |
| twin-arginine translocation pathway signal protein | DCM71_13500 | Not Available | Positive | 2910969 - 2911598 | 22594.3 |
| gmc family oxidoreductase | DCM71_13505 | Not Available | Positive | 2911634 - 2913349 | 64093.0 |
| carboxylesterase/lipase family protein | DCM71_13510 | Not Available | Negative | 2913609 - 2914291 | 24701.4 |
| alpha-rhamnosidase | DCM71_13515 | Not Available | Negative | 2914359 - 2916752 | 89285.3 |
| alpha/beta hydrolase | DCM71_13520 | Not Available | Negative | 2916782 - 2917696 | 33188.1 |
| stress responsive alpha-beta barrel domain-containing protein | DCM71_13525 | Not Available | Negative | 2917726 - 2918019 | 11399.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
