Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase | DCM71_13050 | Not Available | Positive | 2814490 - 2815139 | 24170.2 |
| peptidase m28 | DCM71_13055 | Not Available | Positive | 2815140 - 2816591 | 54393.2 |
| dehydratase | DCM71_13060 | Not Available | Positive | 2816598 - 2817056 | 16960.4 |
| 3-oxoacyl-acp reductase | DCM71_13065 | Not Available | Positive | 2817077 - 2817811 | 26553.0 |
| acyl-coa dehydrogenase | DCM71_13070 | Not Available | Positive | 2817898 - 2819055 | 42273.9 |
| arac family transcriptional regulator | DCM71_13075 | Not Available | Positive | 2819245 - 2820171 | 35452.9 |
| membrane or secreted protein | DCM71_13080 | Not Available | Positive | 2820212 - 2821015 | 30066.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DCM71_13085 | Not Available | Positive | 2821051 - 2822334 | 46588.8 |
| amidophosphoribosyltransferase | DCM71_13090 | Not Available | Positive | 2822460 - 2824367 | 72460.6 |
| xylose isomerase | DCM71_13095 | Not Available | Positive | 2824468 - 2825391 | 34375.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
