Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine-specific dna-methyltransferase | DCM71_12585 | Not Available | Positive | 2719434 - 2720312 | 33958.6 |
| restriction endonuclease | DCM71_12590 | Not Available | Positive | 2720290 - 2721420 | 44244.8 |
| rip metalloprotease rsep | DCM71_12595 | Not Available | Negative | 2721616 - 2722645 | 38091.4 |
| hypothetical protein | DCM71_12600 | Not Available | Negative | 2722686 - 2723282 | 22512.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DCM71_12605 | Not Available | Negative | 2723350 - 2724531 | 43124.2 |
| mandelate racemase/muconate lactonizing protein | DCM71_12610 | Not Available | Positive | 2724705 - 2725910 | 45008.6 |
| tetr family transcriptional regulator | DCM71_12615 | Not Available | Positive | 2726041 - 2726571 | 19955.9 |
| pyridoxamine 5'-phosphate oxidase | DCM71_12620 | Not Available | Positive | 2726830 - 2727459 | 24039.8 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DCM71_12625 | Not Available | Negative | 2727495 - 2729333 | 67845.1 |
| hypothetical protein | DCM71_12630 | Not Available | Positive | 2729363 - 2729578 | 8431.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
