Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xshc-cox1 family protein | DCM71_12520 | Not Available | Negative | 2703758 - 2704879 | 41029.7 |
| tigr00730 family rossman fold protein | DCM71_12525 | Not Available | Positive | 2705015 - 2705614 | 21647.3 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DCM71_12530 | Not Available | Positive | 2705706 - 2706968 | 45704.7 |
| rna polymerase sigma-70 factor | DCM71_12540 | Not Available | Negative | 2708131 - 2708673 | 21166.5 |
| hypothetical protein | DCM71_12550 | Not Available | Positive | 2710956 - 2713190 | 84621.5 |
| hypothetical protein | DCM71_12555 | Not Available | Negative | 2713257 - 2714114 | 32261.5 |
| ferredoxin--nadp(+) reductase | DCM71_12560 | Not Available | Negative | 2714148 - 2714914 | 27787.7 |
| nematoblast specific protein | DCM71_12565 | Not Available | Positive | 2715234 - 2716553 | 49437.0 |
| peptidase m28 | DCM71_12570 | Not Available | Positive | 2716577 - 2717932 | 50646.9 |
| hypothetical protein | DCM71_12575 | Not Available | Positive | 2718051 - 2718599 | 20730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
