Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | DCM71_11690 | Not Available | Negative | 2532673 - 2534001 | 49207.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DCM71_11695 | Not Available | Positive | 2534363 - 2535202 | 30955.5 |
| dihydrodipicolinate synthase family protein | DCM71_11700 | Not Available | Positive | 2535218 - 2535411 | 7258.65 |
| 50s ribosomal protein l2 | DCM71_11705 | Not Available | Positive | 2535412 - 2535550 | 4950.08 |
| 30s ribosomal protein s19 | DCM71_11710 | Not Available | Positive | 2535561 - 2535839 | 10476.7 |
| 50s ribosomal protein l22 | DCM71_11715 | Not Available | Positive | 2535857 - 2536225 | 13724.9 |
| 30s ribosomal protein s3 | DCM71_11720 | Not Available | Positive | 2536241 - 2537053 | 29720.8 |
| 50s ribosomal protein l16 | DCM71_11725 | Not Available | Positive | 2537104 - 2537538 | 16195.9 |
| 50s ribosomal protein l29 | DCM71_11730 | Not Available | Positive | 2537550 - 2537750 | 7500.26 |
| 30s ribosomal protein s17 | DCM71_11735 | Not Available | Positive | 2537790 - 2538068 | 10683.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
