Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine aldolase | DCM71_09170 | Not Available | Positive | 1989606 - 1990619 | 36805.1 |
| hypothetical protein | DCM71_09175 | Not Available | Negative | 1991028 - 1991504 | 18129.8 |
| hypothetical protein | DCM71_09180 | Not Available | Positive | 1991766 - 1992299 | 19766.7 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DCM71_09185 | Not Available | Negative | 1992302 - 1993516 | 45561.6 |
| glycosyl transferase | DCM71_09190 | Not Available | Negative | 1993611 - 1994381 | 29285.2 |
| colanic acid biosynthesis acetyltransferase wcaf | DCM71_09195 | Not Available | Negative | 1994425 - 1995000 | 21940.6 |
| glycosyl transferase | DCM71_09200 | Not Available | Negative | 1994942 - 1995880 | 37144.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DCM71_09205 | Not Available | Positive | 1995976 - 1997199 | 44371.3 |
| abc transporter atp-binding protein | DCM71_09210 | Not Available | Positive | 1997306 - 1999075 | 67444.2 |
| flavin reductase | DCM71_09215 | Not Available | Positive | 1999097 - 1999951 | 31097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
