Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | DCM71_08960 | Not Available | Negative | 1943490 - 1944258 | 29067.6 |
| ighmbp2 family helicase | DCM71_08965 | Not Available | Positive | 1944446 - 1946356 | 71465.8 |
| arac family transcriptional regulator | DCM71_08970 | Not Available | Positive | 1946442 - 1947317 | 33742.1 |
| yran family protein | DCM71_08975 | Not Available | Positive | 1947329 - 1947682 | 13680.3 |
| barnase inhibitor | DCM71_08980 | Not Available | Negative | 1947676 - 1948098 | 15727.6 |
| hypothetical protein | DCM71_08985 | Not Available | Negative | 1948101 - 1949012 | 34798.0 |
| nadp-dependent isocitrate dehydrogenase | DCM71_08990 | Not Available | Negative | 1949068 - 1949453 | 13973.7 |
| susc/raga family tonb-linked outer membrane protein | DCM71_08995 | Not Available | Negative | 1949454 - 1950626 | 41037.1 |
| susc/raga family tonb-linked outer membrane protein | DCM71_09005 | Not Available | Negative | 1952535 - 1955819 | 120450.0 |
| alkaline phosphatase | DCM71_09010 | Not Available | Positive | 1956438 - 1957202 | 27824.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
