Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DCM71_08910 | Not Available | Negative | 1934071 - 1934626 | 21536.5 |
| sensor histidine kinase | DCM71_08915 | Not Available | Negative | 1934651 - 1935712 | 41179.1 |
| arac family transcriptional regulator | DCM71_08920 | Not Available | Positive | 1935913 - 1936818 | 35220.3 |
| short-chain dehydrogenase/reductase | DCM71_08925 | Not Available | Positive | 1936911 - 1937753 | 29986.5 |
| hypothetical protein | DCM71_08930 | Not Available | Positive | 1937803 - 1939596 | 68300.2 |
| duf805 domain-containing protein | DCM71_08935 | Not Available | Positive | 1939709 - 1940005 | 11012.0 |
| hypothetical protein | DCM71_08940 | Not Available | Negative | 1940045 - 1940915 | 31965.1 |
| hypothetical protein | DCM71_08945 | Not Available | Positive | 1940916 - 1941423 | 18470.8 |
| fumarylacetoacetase | DCM71_08950 | Not Available | Negative | 1941544 - 1942737 | 44639.6 |
| homogentisate 1,2-dioxygenase | DCM71_08955 | Not Available | Negative | 1942822 - 1943489 | 25617.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
