Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | DCM71_07580 | Not Available | Positive | 1638374 - 1639408 | 38860.6 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DCM71_07585 | Not Available | Negative | 1639530 - 1642004 | 92783.6 |
| dna-3-methyladenine glycosylase 2 family protein | DCM71_07590 | Not Available | Positive | 1642091 - 1642696 | 23440.2 |
| hypothetical protein | DCM71_07595 | Not Available | Positive | 1642794 - 1643264 | 17521.7 |
| glycoside hydrolase | DCM71_07600 | Not Available | Positive | 1643290 - 1644081 | 30931.3 |
| threonine synthase | DCM71_07605 | Not Available | Negative | 1644327 - 1645511 | 43003.1 |
| lysr family transcriptional regulator | DCM71_07610 | Not Available | Negative | 1645582 - 1646484 | 33179.5 |
| lipoprotein-releasing system atp-binding protein lold | DCM71_07615 | Not Available | Positive | 1646624 - 1647280 | 24157.3 |
| xre family transcriptional regulator | DCM71_07620 | Not Available | Negative | 1647295 - 1648791 | 58042.1 |
| 5-oxoprolinase | DCM71_07625 | Not Available | Negative | 1648882 - 1652628 | 135396.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
