Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | DCM71_06210 | Not Available | Positive | 1338896 - 1339054 | 6351.76 |
| ribonuclease p protein component | DCM71_06215 | Not Available | Positive | 1339131 - 1339243 | 4441.46 |
| atp-dependent clp protease atp-binding subunit clpx | DCM71_06220 | Not Available | Positive | 1339507 - 1340745 | 46215.1 |
| alpha/beta hydrolase | DCM71_06225 | Not Available | Positive | 1340745 - 1341464 | 26541.0 |
| hypothetical protein | DCM71_06230 | Not Available | Positive | 1341598 - 1342191 | 22906.1 |
| hypothetical protein | DCM71_06235 | Not Available | Negative | 1342198 - 1345407 | 121280.0 |
| fad-dependent oxidoreductase | DCM71_06240 | Not Available | Negative | 1345452 - 1346372 | 35740.4 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DCM71_06245 | Not Available | Positive | 1346661 - 1347326 | 23811.8 |
| mfs transporter | DCM71_06250 | Not Available | Positive | 1347382 - 1348677 | 48392.7 |
| duf4440 domain-containing protein | DCM71_06255 | Not Available | Positive | 1348680 - 1349105 | 15409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
