Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DCM71_05940 | Not Available | Positive | 1278304 - 1279641 | 50761.5 |
| dna-binding response regulator | DCM71_05945 | Not Available | Positive | 1279619 - 1280302 | 25869.4 |
| protein-tyrosine-phosphatase | DCM71_05950 | Not Available | Negative | 1280320 - 1280925 | 22361.5 |
| duf2892 domain-containing protein | DCM71_05955 | Not Available | Negative | 1281053 - 1281259 | 7084.15 |
| thioredoxin | DCM71_05960 | Not Available | Negative | 1281294 - 1281617 | 12125.8 |
| hypothetical protein | DCM71_05965 | Not Available | Negative | 1281730 - 1281945 | 8462.54 |
| hypothetical protein | DCM71_05970 | Not Available | Positive | 1282316 - 1282495 | 6923.16 |
| initiator repb protein | DCM71_05975 | Not Available | Negative | 1282680 - 1283585 | 35033.4 |
| hypothetical protein | DCM71_05980 | Not Available | Positive | 1283908 - 1284135 | 9066.06 |
| para family protein | DCM71_05985 | Not Available | Positive | 1284178 - 1285122 | 35215.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
