Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin biosynthesis protein ribf | DCM71_05785 | Not Available | Negative | 1244977 - 1245906 | 34789.8 |
| trna pseudouridine(55) synthase trub | DCM71_05790 | Not Available | Negative | 1245929 - 1246627 | 25854.2 |
| udp-diphosphatase | DCM71_05795 | Not Available | Negative | 1246662 - 1247004 | 12469.7 |
| hypothetical protein | DCM71_05800 | Not Available | Positive | 1247005 - 1248240 | 46760.4 |
| flagellar motor protein motb | DCM71_05805 | Not Available | Positive | 1248337 - 1250358 | 75328.7 |
| metallophosphoesterase | DCM71_05810 | Not Available | Positive | 1250370 - 1250708 | 12815.8 |
| protocatechuate 3,4-dioxygenase subunit alpha | DCM71_05815 | Not Available | Negative | 1250709 - 1250934 | 8166.6 |
| protocatechuate 3,4-dioxygenase subunit beta | DCM71_05820 | Not Available | Negative | 1251037 - 1251741 | 26421.4 |
| arac family transcriptional regulator | DCM71_05825 | Not Available | Positive | 1252210 - 1253082 | 33845.8 |
| mfs transporter | DCM71_05830 | Not Available | Negative | 1253150 - 1254448 | 46435.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
